dalicious ~master (2022-03-10T20:55:15.5110933)
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SequenceAlignment.partial
dalicious
string
SequenceAlignment
Get a partial alignment with respect to
reference
.
struct
SequenceAlignment
(S, alias scoreFun = "a == b ? 0 : 1")
inout pure nothrow
auto
partial
(
in
size_t
begin
,
in
size_t
end
,
Strip
stripInsertions
=
Strip.none
)
out (partialAlignment) { assert (partialAlignment.isValid(), "Partial alignment is invalid"); }
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dalicious
string
SequenceAlignment
aliases
getScore
functions
computeScore
isValid
opDollar
opIndex
opSlice
partial
stripInsertions
toString
variables
editPath
freeShift
indelPenalty
query
reference
score
Get a partial alignment with respect to reference.